It sounds like you are not on the latest source code. Those all sound like issues from a few weeks or so ago. Are you using some pre-compiled binaries, or did you compile your own? What date are the binaries/compile from? If you don't know, you may be able to check your changelog.txt file to see what it shows for the most recent update. Not everyone puts their updates in there, but you can get an idea of what date your update is from by checking it.
Compare it to this one:
https://github.com/EQEmu/Server/blob.../changelog.txt
Threaded Mode
